Welcome to the AssociationViewer homepage


AssociationViewer is a Java application used to display SNPs in a genetic context. Supplementary data (such as genes or LD plots) is downloaded from various public data sources on the fly and saved locally in a cache. Custom data can be added as supplementary tracks.

It is being developed at the Swiss Institute of Bioinformatics, Vital-IT group.

If you use AssociationViewer in your work, please cite this publication:

Olivier Martin, Armand Valsesia, Amalio Telenti, Ioannis Xenarios and Brian J. Stevenson
"AssociationViewer: a scalable and integrated software tool for visualization of large-scale variation data in genomic context"
Bioinformatics doi:10.1093/bioinformatics/btp017