AssociationViewer is a Java application used to display SNPs in a genetic context. Supplementary data (such as genes or LD plots) is downloaded from various public data sources on the fly and saved locally in a cache. Custom data can be added as supplementary tracks.
It is being developed at the Swiss Institute of Bioinformatics, Vital-IT group.
If you use AssociationViewer in your work, please cite this publication:
Olivier Martin, Armand Valsesia, Amalio Telenti, Ioannis Xenarios and Brian J. Stevenson
"AssociationViewer: a scalable and integrated software tool for visualization of large-scale variation data in genomic context"